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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797853.1_cds_XP_016456848.1_5011
CDS Infomation

[gene=LOC107780776] [db_xref=GeneID:107780776] [protein=long chain acyl-CoA synthetase 4-like] [protein_id=XP_016456848.1] [location=complement(join(14106..14141,14248..14367,14506..14688,14897..15036,15128..15373,15863..15980,16106..16181,16608..16674,17331..17418,17496..17606,17812..17979,18657..18751,18833..18872,19031..19107,19721..19769,20308..20364,20586..20675,20927..20990,22121..22272))] [gbkey=CDS]
Sequence

ATGGAGGAAAAGAAGTACGTAGTTGAGGTTGAGAAAGCTAAAGAAGGCAAAGATGGAAGG
CCATCAATAGGACCTGTTTACCGTAATGTCTTAGCCACAGATAGTTTCAGGCCTTTATCT
TATGGACTTGAAAGTTGCTGGGATATTTTCTGTGAGTCTGTCACAAAATTTCCAGAAAGC
CGAATGTTAGGTGAGCGGGAAATGTTTCACGGTCAGGCAGGTAAATACGTTTGGTTAACT
TACAGGGAAGTGTATGATCTAGTGTTAAAAGTTGGAGCTTCTATTCGTGTCTGCGGTGTT
AAGCAAGGTGGAAAATGTGGTATATACGGCGCCAATTGTTCGAACTGGGTCATAAGCATG
CAGGCCTGCAATGCTCATGGTCTTTATTGCGTCCCCTTATATGACACTCTAGGTGCTGGT
GCAGTTGAGTATATCATTTGCCATGCAGAAGTTTCCATTGCTTTTGCAGAGGAAACAAAA
ATTTCTGAGGTGCTCAAAACTTTTCCTAACGCTGGAAAGTTCCTGAAAACTCTTGTAAGC
TTCGGTAAGGTCACACAGGAACAGAAAGACATGGCTGGAACTTTTGACTTGAAACTGTAT
TCTTGGGATGAGTTCTTGCTACTGGGAATGCAAGAGAAATTTGATCTTCCTGTTAAAAAG
AAAATAGATATATGTACAATCATGTACACAAGTGGAACAACTGGTGACCCAAAGGGAGTC
ATGATTTCCAATGAGAGCATTTTATCCCTTATTTCTGGAGTGAACCACCATATGGAGACC
ATGAATGAAGAGTTCACTGATAAGGATGTATATCTGTCGTACCTTCCTTTAGCGCACATA
TTTGATCGGGTCATTGAAGAATTATTCATTTCCAAAGGTGCATCGATAGGTTTTTGGCAT
AAGGATGTTAAACAACTGGTTGATGACATCAAAGAGCTAAAGCCAACTGTATTTTGTGCA
GTTCCGCGTGTGCTGGACAGGATTTATTCAGGTTTGGTGGACAAGATTTCTTCTGCTGGT
TTCCTCAAACACAAACTGTTTAACTTTGCTTTTAATTTCAAACTGGGTAACATGAGTAAA
GGGTATAAACATGCAGAGGCAGCTCCTATTTTTGACAAAATAATTTTCAACAAGGTGAAG
GAGGGTTTAGGAGGAAACTTGCGTCTCATTCTATCGGGAGCAGCACCTCTCTCTTCCACT
GTTGAAACATATTTACGAGTTGTGACATGTGCCAATGTTCTTCAAGGATATGGTTTAACG
GAGACCTGTGCAGGGTCATTTGTTGCAAGACCAGATGAACTTGCAATGGTTGGTACTGTG
GGTCCTCCTTTGCCAATTATAGATGTGTGCCTAGAATCTGTTCCTGAAATGGGGTATGAC
GCCCTTGGAAATACCCCTCGTGGAGAGATATGTATAAGGGGCAAGTGTTTATTCTCAGGA
TACTACAAGCGCGAAGACCTCACCAAAGAGGTGTTGGTCGATGGCTGGTTCCACACAGGT
GATGTTGGTGAATGGCAGCCGGATGGGAGTATGAAAATTATTGACCGGAAGAAAAACATT
TTCAAGCTCTCTCAAGGAGAATATGTTGCAGTTGAGAATCTGGAGGGCATTTATTCTCTT
GCCTCTAGTGTGGATGCAATATGGATCTACGGTAGTAGCTATGAGTCATTTCTTGTTGCC
GTTGTGAATCCCAATATGGGCGCTCTTCAGTCCTGGGCCGAGGAGAATGGACTAACCGGG
GATTTTGATACTATATGTGAAAACCCAAAGGCAAAAGCATATATTCTATCGGAACTAACC
AATACTGCTAAGGAAAAGAAGCTGAAAGGCTTTGAATTTATCAAAGTTGTGCACCTTGAC
CCTATACCATTTGATATGGAGCGTGAACTTCTAACCCCAACTCACAAGAAAAAGAGGGTC
CAGTTTCTCAAATATTACCAGAACATCATTGATACACTGTACGAAAGCACAAGATAA

Peptide Sequence

PEP ID

XP_016456848.1
PEP Infomation

PREDICTED: long chain acyl-CoA synthetase 4-like [Nicotiana tabacum]
Sequence

MEEKKYVVEVEKAKEGKDGRPSIGPVYRNVLATDSFRPLSYGLESCWDIFCESVTKFPES
RMLGEREMFHGQAGKYVWLTYREVYDLVLKVGASIRVCGVKQGGKCGIYGANCSNWVISM
QACNAHGLYCVPLYDTLGAGAVEYIICHAEVSIAFAEETKISEVLKTFPNAGKFLKTLVS
FGKVTQEQKDMAGTFDLKLYSWDEFLLLGMQEKFDLPVKKKIDICTIMYTSGTTGDPKGV
MISNESILSLISGVNHHMETMNEEFTDKDVYLSYLPLAHIFDRVIEELFISKGASIGFWH
KDVKQLVDDIKELKPTVFCAVPRVLDRIYSGLVDKISSAGFLKHKLFNFAFNFKLGNMSK
GYKHAEAAPIFDKIIFNKVKEGLGGNLRLILSGAAPLSSTVETYLRVVTCANVLQGYGLT
ETCAGSFVARPDELAMVGTVGPPLPIIDVCLESVPEMGYDALGNTPRGEICIRGKCLFSG
YYKREDLTKEVLVDGWFHTGDVGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENLEGIYSL
ASSVDAIWIYGSSYESFLVAVVNPNMGALQSWAEENGLTGDFDTICENPKAKAYILSELT
NTAKEKKLKGFEFIKVVHLDPIPFDMERELLTPTHKKKRVQFLKYYQNIIDTLYESTR

Transcript Sequence

Gene sequence data has not been registered.